Boat Charters Blue lagoon, Crystal Lagoon, Comino, Malta

Exploring Malta by Boat: A Detailed Look at the Blue Lagoon, Crystal Lagoon, and More

Malta’s coastline is dotted with sparkling bays, hidden caves, and dramatic rock formations, making it an ideal spot for exploring by boat. Recently, we looked into a private boat tour that promises a flexible, intimate way to see some of the most iconic sights around Comino and Gozo. Whether you’re chasing picture-perfect scenery, crave a fun snorkeling adventure, or just want some time to relax on crystal-clear waters, this trip ticks many boxes.

What makes this tour particularly appealing is that it’s private, meaning you get personalized attention from a knowledgeable local skipper, along with the comfort of a smaller vessel. Plus, the itinerary covers everything from famous lagoons to historic forts—offering more than just pretty views.

One thing to keep in mind is that this tour is priced at about $295 for up to 11 people—so, it’s a good value if you’re traveling with family or friends. However, booking 16 days in advance is typical, so plan ahead to secure your preferred date. This experience suits those looking for a balanced mix of sightseeing, swimming, and cultural insights, with enough flexibility to make it special.

Key Points

• Private and personalized experience with a knowledgeable local skipper.
• Seven stops covering lagoons, caves, historic sites, and scenic bays.
• Ideal for families, adventure seekers, and lovers of tranquility.
• Includes essentials like snorkeling gear, water, and boat facilities.
• Great value for a small group—fewer crowds and more comfort.
• Booking early ensures availability, especially during peak season.

A Deep Dive into the Malta Boat Tour Experience

The Convenience of a Private Boat

From the outset, what stands out about this tour is its private nature. Unlike large, crowded group excursions, this journey keeps it intimate, meaning you can relax and enjoy the scenery without fighting for space. The boat comfortably accommodates up to 11 people, which reviewers like Melissa W. appreciated when she noted how much room they had to unwind, and how clean and well-maintained the boat was. The inclusion of amenities like a shower and toilet adds to the comfort, especially for longer days at sea.

The Itinerary Breakdown

Stop 1: Blue Lagoon

The tour kicks off at Malta’s most famous attraction—the Blue Lagoon. With crystal-clear waters and soft sandy beaches, it’s no surprise this spot tops many travelers’ wishlists. We loved the way this stop allows swimming and relaxing right from the boat, while avoiding the crowds that flock here during peak hours. Caroline H. praised the experience, calling it “such a beautiful part of the world” and recommending an early start to beat the crowds.

Expect to spend about 45 minutes here, enough time to take some photos, paddle, or just soak up the serenity. The water is so clear you might think you’re floating in a giant swimming pool, but with the added bonus of being away from the throngs of day-trippers.

Stop 2: Crystal Lagoon

Next up is the Crystal Lagoon, a favorite for snorkelers and cliff-divers alike. The waters here are just as inviting, with stunning scenery including Lovers Cave and Popeye’s Arch, which add a touch of adventure and photo opportunities. You’ll spend about half an hour exploring, swimming, or jumping into the water—something Melissa W. highlighted as “incredible” and a highlight of her day.

Passing St. Mary’s Tower

As the boat cruises past, you’ll see St Mary’s Tower, built by the Knights of St John in the early 17th century. This historic structure gained fame from the movie The Count of Monte Cristo, where it was depicted as a prison. Passing by historical landmarks adds a layer of cultural context to your scenic day, giving you a glimpse into Malta’s strategic past.

Stop 3: Saint Mary’s Battery

The next stop is near the Saint Mary’s Battery, an 18th-century fortress that once protected the southern channel. The scenery here is striking, and underneath the battery lies a beautiful swimming spot. This stop allows about 30 minutes for swimming and soaking up the backdrop of historic stonework.

Passing Elephant Head Rock

On your way to Comino, you’ll pass the Elephant Head Rock, an impressive natural formation also seen in The Count of Monte Cristo. Reviewers mentioned how this striking feature makes for an excellent photo backdrop and adds a touch of cinematic charm to the journey.

Santa Maria Caves

The Santa Maria Caves are a series of five caves on the northern side of Comino. This part of the trip is a true highlight—small, accessible caves to explore, with dramatic formations and calm waters perfect for snorkeling. A quick 10-minute stop, but one that packs a punch for lovers of underwater scenery.

Bays and Tranquil Waters

The tour continues with visits to Santa Maria Bay and San Niklaw Bay, both offering pristine sandy beaches and calm waters. These stops are perfect for swimming, relaxing on the sand, or just floating in the inviting waters. Melissa W. called the bays “incredible,” emphasizing how peaceful and beautiful they are—an ideal escape from the busy mainland.

Final Stop: Alfa Rock

The last stop takes you to Alfa Rock on the east side of Gozo, where the scenery continues to impress. With crystal-clear waters suitable for swimming and snorkeling, it caps off the tour with a final splash of beauty before heading back.

What’s Included and What’s Not

The tour package includes fuel, a skilled skipper, use of boat facilities, and essentials like drinking water, ice, snorkel gear, and a guide speaking English and Italian. These extras make for a smooth experience, especially if you’re not packing your own gear.

However, private transportation to and from the marina isn’t included, so plan accordingly. Most travelers find the boat experience itself worth the price, especially given the personalized attention and the chance to explore off-the-beaten-path spots.

Booking and Practical Tips

Booking typically opens about 16 days in advance, with many travelers preferring to secure their spot early. The tour lasts approximately 3.5 hours, making it a perfect half-day adventure. If you’re traveling with family or friends, this is considered excellent value, given the exclusivity and tailored experience.

In terms of weather, note that the tour operates in good weather conditions, and any cancellations due to poor weather will be rescheduled or refunded—so there’s some peace of mind.

Authentic Experiences from Reviewers

One reviewer, Caroline H., described her experience as “paradise,” highlighting how being on a smaller vessel made a difference. She also recommended an early start to beat the crowds, a tip many seasoned travelers appreciate. Melissa W. appreciated “everything running smoothly,” especially praising Nicholas, the guide, for his friendliness and helpfulness.

Who Will Love This Tour?

This private boat trip is perfect for those who want to see Malta’s highlights with a personal touch—families, couples, or small groups of friends. It’s well-suited for adventure seekers who want snorkeling, cliff jumping, and exploring caves, as well as travelers seeking a peaceful, scenic escape.

It’s also ideal for anyone prioritizing comfort, flexibility, and a less crowded experience. If you’re after a more immersive, tailored day on the water that combines natural beauty with a dash of history, this tour checks all those boxes.

The Sum Up: Is It Worth It?

For travelers craving a luxurious, yet relaxed day exploring Malta’s coastlines, this private boat tour offers excellent value. The itinerary covers all the must-see spots like Blue Lagoon and Santa Maria Caves, but with the added benefit of privacy and expert local guidance.

The experience’s highlight is the chance to swim in beautifully clear waters, visit caves, and enjoy scenic bays, all while having a knowledgeable skipper at your side. The included amenities and flexible stops mean you can tailor your day to your mood—whether that’s kicking back on the boat or diving into an underwater adventure.

This tour is especially suitable for anyone who wants to avoid the crowds, appreciates comfort, and loves blending sightseeing with swimming and relaxation. It also makes a fantastic option for families or small groups seeking a special, memorable day on the Maltese waters.

FAQ

Is this tour suitable for children?
Yes, the tour is recommended for families, especially since it includes stops for swimming, snorkeling, and relaxing in calm waters. The boat facilities and safety equipment make it child-friendly.

What should I bring?
Bring your swimwear, sunscreen, towel, and possibly a waterproof camera. The boat supplies snorkel gear and water, but you might want to pack snacks or additional drinks if desired.

Can I book this tour last-minute?
It’s best to book at least 16 days in advance, as it’s a popular experience and fills up quickly. Check availability early to secure your preferred date.

Are there any hidden costs?
The price covers the boat, skipper, fuel, and essentials like water and snorkel gear. Private transportation to the marina is not included but can be arranged for an extra fee.

What happens if the weather is bad?
The tour operates in good weather. If canceled due to poor conditions, you’ll be offered a different date or a full refund.

Is the tour group size small?
Yes, with a maximum of 11 people, it’s designed for a more intimate experience compared to larger group excursions.

This private boat trip around Malta offers a fantastic mix of natural beauty, historical sights, and personalized service. Whether you’re after adventure, relaxation, or a little of both, it’s a memorable way to see some of Malta’s most breathtaking spots.