Three Bay Cruise Including Blue Lagoon from Mellieha

A Complete Guide to the Three Bay Cruise Including Blue Lagoon from Mellieha

Exploring Malta’s famed coastlines is an absolute highlight for many travelers, and a boat trip like this offers an ideal way to see multiple gorgeous spots in one day. This 6-hour cruise takes you along the northern shores of Malta and beyond, stopping at three spectacular locations: Blue Lagoon, Crystal Lagoon, and Alfa Rock Bay in Gozo. With clear waters, secluded beaches, and stunning scenery, it promises a well-rounded experience that balances relaxation, adventure, and picture-perfect moments.

While the price tag of around $46 per person might seem modest, what really counts is the quality of the stops, the comfort of the boat, and the atmosphere created by the crew. We love how each location has its own character, from the iconic turquoise waters of Blue Lagoon to the hidden gem of Alfa Rock. That said, one thing to keep in mind is the need to plan ahead for the Blue Lagoon’s mandatory government permit if you want to step ashore — a new regulation that can be a small logistical hurdle but is well worth navigating for the experience.

This cruise is best suited for travelers who enjoy scenic boat rides, swimming in crystal-clear waters, and discovering Malta’s lesser-known coastal spots. It’s ideal for those who want a relaxed yet active day, with enough time to unwind between stops and enjoy the views. If you’re prone to seasickness or have mobility issues, it’s worth noting that the tour involves multiple stops and some boat movement. This trip offers excellent value for anyone looking to combine sightseeing with some fun in the sun.

Key Points

• Multiple stops with ample swimming time ensure you’ll experience each location without feeling hurried.
• Stunning scenery and crystal-clear waters make this a visually rewarding tour.
• The crew’s friendly assistance and small amenities on board enhance the overall comfort.
• Pre-booking the Blue Lagoon access pass is essential due to government regulations.
• The tour balances active swimming and relaxing onboard time, giving a well-rounded experience.
• Great for those wanting authentic, scenic spots and easy access to Malta’s coast.

Detailed Review of the Three Bay Cruise from Mellieha

Starting Point and Overall Experience

The adventure begins at Marfa Jetty in Mellieha, a convenient location near public transport. Once onboard, the boat is spacious enough to accommodate up to 55 travelers, with a friendly crew ready to assist, making it a comfortable setting for a day out on the water. The duration of roughly six hours includes all stops and cruising time, providing a generous window to enjoy each destination, soak up the sun, and marvel at the scenery.

The cruise offers a mobile ticket system, which simplifies boarding, but keep in mind the boarding closes 20 minutes before departure—so arriving on time is key. During the trip, you’ll pass notable landmarks like the Santa Maria Caves and Elephant Head rock, which make for captivating views from the water.

The Itinerary Breakdown

Stop 1: Blue Lagoon in Comino

The first major highlight is Blue Lagoon, renowned for its dazzling turquoise waters and pristine white sandy base. It’s a Malta icon for good reason—its water clarity and marine life make it perfect for swimming and snorkeling. The boat anchors nearby, allowing about 1½ hours for you to jump into the water, relax on deck, or explore the surrounding countryside.

A standout comment from a recent traveler was, “This was a nice version of the boat tours in Malta. We were able to stop in 3 locations and spend enough time in each without feeling rushed.” The spacious time allocated means you can take your time floating, sunbathing, or walking around.

However, note that to step ashore at Blue Lagoon, you need an official government-issued access pass obtained in advance from blcomino.com. This regulation, effective from May 2025, is designed to control overcrowding but means planning ahead is necessary if you want to get ashore.

Stop 2: Crystal Lagoon in Comino

Next, the cruise heads to Crystal Lagoon on the west side of Comino. This spot is favored by snorkelers and divers due to its calm, crystal-clear waters and stunning cliff-surrounded environment. You’re given about an hour here, enough for a quick swim, a snorkel, or some exploration of nearby sea caves.

According to reviews, the lagoon’s sheltered waters and 360-degree views make it one of the most scenic and peaceful spots in the archipelago. One traveler described it as “one of the nicest and most sheltered lagoons,” making it perfect for a relaxed dip, away from the busier Blue Lagoon.

The proximity of sea caves adds an adventurous touch—be sure to bring your snorkel gear if you want to explore underwater.

Stop 3: Alfa Rock Bay in Gozo

The last swimming stop takes place at Alfa Rock Bay, a secluded, untouched cove on the southeast coast of Gozo. This tiny islet with a pebbly beach offers a peaceful retreat far from the summer crowds. It’s the perfect spot for your final swim, with about an hour allocated.

Reviewers have described Alfa Rock Bay as a hidden gem, with one noting how it retains its charm when other bays become crowded. The natural beauty, combined with the quiet ambiance, makes it a favorite for those seeking tranquility.

Scenic Return and Additional Highlights

On the return journey, you’ll cruise past Santa Maria Caves and the striking Elephant Head rock formation—both known for their photogenic qualities. Many travelers mention how these landmarks add a sense of adventure and awe to the trip, with some noting the views are so impressive they make the whole cruise feel like an excursion in its own right.

Amenities and Practical Details

The boat includes toilet facilities and a shower, which are handy after swimming. There’s also a small cash bar offering snacks and beverages, perfect for staying refreshed without overspending. Assistance from the crew is available throughout, and they are often praised for their friendliness.

The tour’s price of around $46.26 represents good value considering the three stops, swimming opportunities, and scenic cruising. The cost does not include the Blue Lagoon permit, which you need to arrange separately—it’s a small extra step but essential for ashore access.

Who Would Enjoy This Tour?

This trip is perfect for travelers seeking a relaxed, scenic day in Malta’s waters. It suits those who love swimming and snorkeling in beautiful settings, with enough time to enjoy each stop. It’s also suitable for families, couples, or solo adventurers who enjoy a bit of sunshine and ocean breeze.

However, those with mobility issues or prone to seasickness should consider their comfort, as the trip involves boat movement and multiple swimming stops. It’s also best for travelers who don’t mind pre-planning to secure the Blue Lagoon access pass.

Final Thoughts

This 6-hour boat cruise offers a well-balanced mix of sightseeing, swimming, and scenic cruising. The stops at Blue Lagoon, Crystal Lagoon, and Alfa Rock Bay showcase the diversity of Malta’s coast—from iconic turquoise waters to hidden retreats.

The experience’s strength lies in its authenticity and laid-back vibe, with friendly crew, stunning views, and enough time to relax and explore. While the need for an advance permit at Blue Lagoon adds a small layer of planning, it’s a worthwhile step to enjoy this famous spot without feeling overwhelmed by crowds.

For travelers wanting a straightforward, enjoyable day out on the water that combines natural beauty with a touch of adventure, this cruise hits the spot. It’s especially suited for those who appreciate quiet coves, snorkel-friendly waters, and scenic photo ops, all at a reasonable price.

FAQ

Do I need to book in advance?
Yes, especially since you must acquire an official government pass for Blue Lagoon ashore. Booking at least 18 days in advance helps secure your spot.

Is the tour suitable for children?
Most travelers can participate, but consider the boat movement and swimming stops if you are traveling with very young children or those with mobility issues.

Can I swim at all the stops?
Yes, each stop is designed for swimming and relaxing in the water. You’ll have plenty of time at each location to enjoy the sea.

Are food and drinks included?
No, but a small cash bar on the boat offers snacks and beverages for purchase. No meals are provided.

What should I bring?
Swimwear, towel, sunscreen, camera, and possibly a waterproof case for your valuables. An advance Blue Lagoon permit is essential if you want to ashore.

What’s the maximum group size?
The tour can accommodate up to 55 travelers, ensuring a lively but not overcrowded experience.

What if the weather is bad?
Cancellation due to weather is possible. If that happens, you’ll be offered rescheduling or a full refund.

How long is the cruise?
Approximately 6 hours, including all stops and cruising time.

Is there a pickup?
No, the meeting point is at Marfa Jetty in Mellieha. Make sure to arrive on time to avoid missing the boat.

In summary, this cruise is an excellent way to see the highlights of Malta’s northern coast and nearby islands with minimal fuss. Its combination of scenic cruises, authentic spots, and friendly crew make it a highly recommendable experience for anyone wanting to enjoy Malta’s natural beauty at a reasonable price. Just be sure to plan ahead for the Blue Lagoon permit and pack your swim gear — you’re in for a memorable day on the Maltese waters.